@article {3907, title = {PT-like phase transition and limit cycle oscillations in non-reciprocally coupled optomechanical oscillators levitated in vacuum}, journal = {Nat. Phys.}, year = {2024}, note = {

Publisher: Nature Publishing Group

}, pages = {1{\textendash}7}, abstract = {

Nanoparticles levitated in an optical trap provide a versatile platform to study mechanical oscillators in a controlled environment with tuneable parameters. Recently, it has become possible to couple two of these optomechanical oscillators. Here we demonstrate the collective non-Hermitian dynamics of such a pair of non-conservatively coupled oscillators. We take advantage of the tunability of the optical interactions between the particles in our system and set the optical interaction between the particles to be purely non-reciprocal. By continuously varying the relative power of the trapping beams, we take the system through a transition similar to a parity{\textendash}time phase transition. A Hopf bifurcation at a critical point results in the formation of collective limit cycle oscillations, resembling those observed in phonon lasers. These coupled levitated oscillators provide a platform for exceptional point optomechanical sensing and can be extended to multi-particle systems, paving the way for the development of topological optomechanical media.

}, keywords = {LF, MF}, issn = {1745-2481}, doi = {10.1038/s41567-024-02590-1}, url = {https://www.nature.com/articles/s41567-024-02590-1}, author = {Li{\v s}ka, Vojt{\v e}ch and Zem{\'a}nkov{\'a}, Tereza and J{\'a}kl, Petr and {\v S}iler, Martin and Simpson, Stephen H. and Zem{\'a}nek, Pavel and Brzobohat{\'y}, Oto} } @article {3728, title = {SERS-Tags: Selective Immobilization and Detection of Bacteria by Strain-Specific Antibodies and Surface-Enhanced Raman Scattering}, journal = {Biosensors}, volume = {13}, year = {2023}, pages = {182}, keywords = {BF, MF}, issn = {2079-6374}, doi = {10.3390/bios13020182}, url = {https://www.mdpi.com/2079-6374/13/2/182}, author = {Bene{\v s}ov{\'a}, Mark{\'e}ta and Bernatov{\'a}, Silvie and Mika, Filip and Pokorn{\'a}, Zuzana and Je{\v z}ek, Jan and {\v S}iler, Martin and Samek, Ota and R{\r u}{\v z}i{\v c}ka, Filip and Rebro{\v s}ov{\'a}, Katar{\'\i}na and Zem{\'a}nek, Pavel and Pil{\'a}t, Zden{\v e}k} } @article {3754, title = {Synchronization of spin-driven limit cycle oscillators optically levitated in vacuum}, journal = {Nature Communications}, volume = {14}, year = {2023}, pages = {5441}, keywords = {LF, MF}, doi = {10.1038/s41467-023-41129-5}, url = {https://doi.org/10.1038/s41467-023-41129-5}, author = {Brzobohat{\'y}, Oto and Ducha{\v n}, Martin and J{\'a}kl, Petr and Je{\v z}ek, Jan and {\v S}iler, Martin and Zem{\'a}nek, Pavel and Simpson, Stephen H.} } @article {3606, title = {All-optical sub-Kelvin sympathetic cooling of a levitated microsphere in vacuum}, journal = {Optica}, volume = {9}, year = {2022}, month = {Sep}, pages = {1000{\textendash}1002}, abstract = {

We demonstrate all-optical sympathetic cooling of a laser-trapped microsphere to sub-Kelvin temperatures, mediated by optical binding to a feedback-cooled adjacent particle. Our study opens prospects for multi-particle quantum entanglement and sensing in levitated optomechanics.

}, keywords = {LF, MF}, doi = {10.1364/OPTICA.466337}, url = {https://opg.optica.org/optica/abstract.cfm?URI=optica-9-9-1000}, author = {Y. Arita and G. D. Bruce and E. M. Wright and S. H. Simpson and P. Zem{\'a}nek and K. Dholakia} } @article {3545, title = {Challenges on optical printing of colloidal nanoparticles}, journal = {J. Chem. Phys.}, volume = {156}, year = {2022}, month = {JAN 21}, pages = {034201}, keywords = {LF, MF}, issn = {0021-9606}, doi = {10.1063/5.0078454}, author = {Violi, Ianina L. and Martinez, Luciana P. and Barella, Mariano and Zaza, Cecilia and Chv{\'a}tal, Lukas and Zem{\'a}nek, Pavel and Gutierrez, Marina V. and Paredes, Maria Y. and Scarpettini, Alberto F. and Olmos-Trigo, Jorge and Pais, Valeria R. and Noblega, Ivan Diaz and Cort{\`e}s, Emiliano and Saenz, Juan Jose and Bragas, Andrea V. and Gargiulo, Juli{\`a}n and Stefani, Fernando D.} } @article {3503, title = {Endoscopic Imaging Using a Multimode Optical Fibre Calibrated with Multiple Internal References}, journal = {Photonics}, volume = {9}, year = {2022}, pages = {37}, keywords = {BF, KF, MF}, doi = {10.3390/photonics9010037}, url = {https://www.mdpi.com/2304-6732/9/1/37}, author = {J{\'a}kl, Petr and {\v S}iler, Martin and Je{\v z}ek, Jan and Cifuentes, Angel and Tr{\"a}g{\r a}rdh, Johanna and Zem{\'a}nek, Pavel and Cizmar, Tomas} } @article {3589, title = {In Vivo Contrast Imaging of Rat Heart with Carbon Dioxide Foam}, journal = {SENSORS}, volume = {22}, year = {2022}, month = {JUL}, pages = {5124}, keywords = {BF, MF}, doi = {10.3390/s22145124}, author = {Karalko, Anton and Kesa, Peter and Jelinek, Frantisek and Sefc, Ludek and Je{\v z}ek, Jan and Zem{\'a}nek, Pavel and Grus, Tomas} } @article {3481, title = {Optically transportable optofluidic microlasers with liquid crystal cavities tuned by the electric field}, journal = {ACS Applied Materials \& Interfaces}, volume = {13}, year = {2021}, month = {OCT 21}, pages = {50657-50667}, keywords = {BF, LF, MF}, doi = {10.1021/acsami.1c11936}, author = {Jonas, Alexandr and Pil{\'a}t, Zden{\v e}k and Je{\v z}ek, Jan and Bernatov{\'a}, Silvie and Jedli{\v c}ka, Petr and Aas, Mehdi and Kiraz, Alper and Zem{\'a}nek, Pavel} } @article {3417, title = {Raman Microspectroscopic Analysis of Selenium Bioaccumulation by Green Alga Chlorella vulgaris}, journal = {Biosensors}, volume = {11}, year = {2021}, pages = {115}, keywords = {BF, MF}, issn = {2079-6374}, doi = {10.3390/bios11040115}, url = {https://www.mdpi.com/2079-6374/11/4/115}, author = {Kizovsk{\'y}, Martin and Pil{\'a}t, Zden{\v e}k and Mylenko, Mykola and Hrouzek, Pavel and Kuta, Jan and Skoup{\'y}, Radim and Krzy{\v z}{\'a}nek, Vladislav and Hrubanov{\'a}, Kamila and Adamczyk, Olga and Je{\v z}ek, Jan and Bernatov{\'a}, Silvie and Klementov{\'a}, Tereza and Gjevik, Al{\v z}b{\v e}ta and {\v S}iler, Martin and Samek, Ota and Zem{\'a}nek, Pavel} } @article {3478, title = {Stochastic Hopf bifurcations in vacuum optical tweezers}, journal = {Phys. Rev. A}, volume = {104}, year = {2021}, month = {OCT 15}, pages = {043518}, keywords = {LF, MF}, issn = {2469-9926}, doi = {10.1103/PhysRevA.104.043518}, author = {Simpson, Stephen H. and Arita, Yoshihiko and Dholakia, Kishan and Zem{\'a}nek, Pavel} } @article {3335, title = {Using the transient trajectories of an optically levitated nanoparticle to characterize a stochastic Duffing oscillator}, journal = {Scientific Reports}, volume = {10}, year = {2020}, pages = {14436}, keywords = {LF, MF}, author = {Flaj{\v s}manov{\'a}, Jana and {\v S}iler, Martin and Jedli{\v c}ka, Petr and Hrub{\'y}, Franti{\v s}ek and Brzobohat{\'y}, Oto and Filip, Radim and Zem{\'a}nek, Pavel} } @article {3189, title = {Identification of ability to form biofilm in Candida parapsilosis and Staphylococcus epidermidis by Raman spectroscopy}, journal = {Future Microbiology}, volume = {14}, year = {2019}, pages = {509-517}, abstract = {

Aim: Finding rapid, reliable diagnostic methods is a big challenge in clinical microbiology. Raman spectroscopy is an optical method used for multiple applications in scientific fields including microbiology. This work reports its potential in identifying biofilm positive strains of Candida parapsilosis and Staphylococcus epidermidis. Materials \& methods: We tested 54 S. epidermidis strains (23 biofilm positive, 31 negative) and 51 C. parapsilosis strains (27 biofilm positive, 24 negative) from colonies on Mueller-Hinton agar plates, using Raman spectroscopy. Results: The accuracy was 98.9\% for C. parapsilosis and 96.1\% for S. epidermidis. Conclusion: The method showed great potential for identifying biofilm positive bacterial and yeast strains. We suggest that Raman spectroscopy might become a useful aid in clinical diagnostics.

}, keywords = {BF, KF, MF}, doi = {10.2217/fmb-2018-0297}, url = {https://doi.org/10.2217/fmb-2018-0297}, author = {Rebro{\v s}ov{\'a}, Katar{\'\i}na and {\v S}iler, Martin and Samek, Ota and R{\r u}{\v z}i{\v c}ka, Filip and Bernatov{\'a}, Silvie and Je{\v z}ek, Jan and Zem{\'a}nek, Pavel and Hol{\'a}, Veronika} } @article {DonatoNL19, title = {Optical Trapping, Optical Binding, and Rotational Dynamics of Silicon Nanowires in Counter-Propagating Beams}, journal = {Nano Lett.}, volume = {19}, year = {2019}, pages = {342-352}, keywords = {LF, MF}, doi = {10.1021/acs.nanolett.8b03978}, author = {Donato, Maria G. and Oto Brzobohat{\'y} and S. H. Simpson and Irrera, Alessia and Leonardi, Antonio A. and Lo Faro, Maria J. and Vojtech Svak and Marag{\`o}, Onofrio M. and P. Zem{\'a}nek} } @article { BrzobohatyOL19, title = {Optomechanical properties of optically self-arranged colloidal waveguides}, journal = {Opt. Lett.}, volume = {44}, year = {2019}, pages = {707-710}, keywords = {LF, MF}, doi = {10.1364/OL.44.000707}, author = {Oto Brzobohat{\'y} and Luk{\'a}{\v s} Chv{\'a}tal and P. Zem{\'a}nek} } @article { ArzolaSR19, title = {Spin to orbital light momentum conversion visualized by particle trajectory}, journal = {Sci. Rep.}, volume = {9}, year = {2019}, pages = {4127:1-7}, keywords = {LF, MF}, doi = {10.1038/s41598-019-40475-z}, author = {Alejandro V. Arzola and Luk{\'a}{\v s} Chv{\'a}tal and P J{\'a}kl and P. Zem{\'a}nek} } @article { BrzobohatyACSPHOT19, title = {Tunable Soft-Matter Optofluidic Waveguides Assembled by Light}, journal = {ACS Phot.}, volume = {6}, year = {2019}, pages = {403-410}, keywords = {LF, MF}, doi = {10.1021/acsphotonics.8b01331}, author = {Oto Brzobohat{\'y} and Luk{\'a}{\v s} Chv{\'a}tal and A. Jon{\'a}{\v s} and M {\v S}iler and J. Ka{\v n}ka and J Je{\v z}ek and P. Zem{\'a}nek} } @article {3104, title = {Wavelength-Dependent Optical Force Aggregation of Gold Nanorods for SERS in a Microfluidic Chip}, journal = {J. Phys. Chem. C}, volume = {123}, year = {2019}, pages = {5608-5615}, keywords = {BF, MF}, doi = {10.1021/acs.jpcc.8b12493}, author = {Bernatov{\'a}, Silvie and Donato, Maria Grazia and Je{\v z}ek, Jan and Pil{\'a}t, Z. and Samek, Ota and Magazzu, Alessandro and Marag{\`o}, Onofrio M. and Zem{\'a}nek, Pavel and Gucciardi, Pietro G.} } @article { PilatSENS18SERS, title = {Detection of chloroalkanes by surface-enhanced raman spectroscopy in microfluidic chips}, journal = {Sensors}, volume = {18}, year = {2018}, pages = {3212}, keywords = {BF, MF}, doi = {10.3390/s18103212}, author = {Z. Pil{\'a}t and Kizovsk{\'y}, M. and J Je{\v z}ek and Kr{\'a}tk{\'y}, S. and Sobota, J. and M {\v S}iler and O. Samek and Bury{\v s}ka, T. and Va{\v n}{\'a}{\v c}ek, P. and Damborsk{\'y}, J. and Prokop, Z. and P. Zem{\'a}nek} } @article {SilerPRL18, title = {Diffusing up the Hill: Dynamics and Equipartition in Highly Unstable Systems}, journal = {Phys. Rev. Lett.}, volume = {121}, year = {2018}, pages = {23601}, keywords = {LF, MF}, doi = {10.1103/PhysRevLett.121.230601}, author = {M {\v S}iler and Ornigotti, L. and Oto Brzobohat{\'y} and P J{\'a}kl and Artem Ryabov and Holubec, V. and P. Zem{\'a}nek and Radim Filip} } @article { DamkovaLSA18, title = {Enhancement of the {\textquoteleft}tractor-beam{\textquoteright} pulling force on an optically bound structure}, journal = {Light: Sci. Appl.}, volume = {7}, year = {2018}, pages = {17135}, keywords = {LF, MF}, doi = {10.1038/lsa.2017.135}, author = {Damkov{\'a}, Jana and Luk{\'a}{\v s} Chv{\'a}tal and J Je{\v z}ek and Oulehla, Jindrich and Oto Brzobohat{\'y} and P. Zem{\'a}nek} } @article { PilatSENS18Ecoli, title = {Microfluidic Cultivation and Laser Tweezers Raman Spectroscopy of E-coli under Antibiotic Stress}, journal = {Sensors}, volume = {18}, year = {2018}, pages = {1623}, keywords = {BF, MF}, doi = {10.3390/s18051623}, author = {Z. Pil{\'a}t and Silva Bernatov{\'a} and J Je{\v z}ek and Kirchhoff, J. and Tannert, A. and Neugebauer, U. and O. Samek and P. Zem{\'a}nek} } @article {SvakNC18, title = {Transverse spin forces and non-equilibrium particle dynamics in a circularly polarized vacuum optical trap}, journal = {Nature Commun.}, volume = {9}, year = {2018}, pages = {5453}, keywords = {LF, MF}, doi = {10.1038/s41467-018-07866-8}, author = {Vojtech Svak and Oto Brzobohat{\'y} and M {\v S}iler and P J{\'a}kl and J. Ka{\v n}ka and P. Zem{\'a}nek and S. H. Simpson} } @article { GargiuloACSNano17, title = {Accuracy and Mechanistic Details of Optical Printing of Single Au and Ag Nanoparticles}, journal = {ACS nano}, volume = {11}, number = {10}, year = {2017}, pages = {9678{\textendash}9688}, keywords = {LF, MF}, doi = {10.1021/acsnano.7b04136}, author = {Gargiulo, Juli{\`a}n and Violi, Ianina L and Cerrota, Santiago and Luk{\'a}{\v s} Chv{\'a}tal and Cort{\`e}s, Emiliano and Perassi, Eduardo M and Diaz, Fernando and P. Zem{\'a}nek and Stefani, Fernando D} } @article {RebrosovsaFB17, title = {Differentiation between Staphylococcus aureus and Staphylococcus epidermidis strains using Raman spectroscopy}, journal = {Future Microbiology}, volume = {12}, year = {2017}, pages = {10}, keywords = {BF, MF}, doi = {10.2217/fmb-2016-0224}, author = {K. Rebro{\v s}ov{\'a} and M {\v S}iler and O. Samek and F. R{\r u}{\v z}i{\v c}ka and Silva Bernatov{\'a} and J Je{\v z}ek and P. Zem{\'a}nek and V. Hol{\'a}} } @article { KarasekOL17, title = {Dynamics of an optically bound structure made of particles of unequal sizes}, journal = {Opt. Lett.}, volume = {42}, number = {7}, year = {2017}, pages = {1436-1439}, keywords = {LF, MF}, issn = {0146-9592}, doi = {10.1364/OL.42.001436}, author = {V{\'\i}t{\v e}zslav Kar{\'a}sek and M {\v S}iler and Oto Brzobohat{\'y} and P. Zem{\'a}nek} } @article {PilatSENS17, title = {Effects of Infrared Optical Trapping on Saccharomyces cerevisiae in a Microfluidic System}, journal = {Sensors}, volume = {17}, year = {2017}, pages = {2640}, keywords = {BF, MF}, doi = {10.3390/s17112640}, author = {Z. Pil{\'a}t and A. Jon{\'a}{\v s} and J Je{\v z}ek and P. Zem{\'a}nek} } @article {HrubanovaMM17, title = {Morphological and Production Changes in Planktonic and Biofilm Cells Monitored Using SEM and Raman Spectroscopy}, journal = {Microscopy and Microanalysis}, volume = {23}, year = {2017}, pages = {S1}, keywords = {BF, MF}, doi = {10.1017/S1431927617006456}, author = {K. Hrubanov{\'a} and V. Krzy{\v z}{\'a}nek and O. Samek and R. Skoup{\'y} and M {\v S}iler and J Je{\v z}ek and S. Obru{\v c}a and P. Zem{\'a}nek} } @article { ArzolaPRL17, title = {Omnidirectional Transport in Fully Reconfigurable Two Dimensional Optical Ratchets}, journal = {Phys. Rev. Lett.}, volume = {118}, year = {2017}, pages = {138002}, keywords = {LF, MF}, doi = {10.1103/PhysRevLett.118.138002}, author = {Alejandro V. Arzola and Villasante-Barahona, Mario and Karen Volke-Sep{\'u}lveda and P J{\'a}kl and P. Zem{\'a}nek} } @article { SimpsonNL17, title = {Optical Binding of Nanowires}, journal = {Nano Lett.}, volume = {17}, number = {6}, year = {2017}, pages = {3485-3492}, keywords = {LF, MF}, doi = {10.1021/acs.nanolett.7b00494}, author = {S. H. Simpson and P. Zem{\'a}nek and Marag{\`o}, Onofrio M. and Jones, Philip H. and Hanna, Simon} } @article {RebrosovaSR17, title = {Rapid identification of staphylococci by Raman spectroscopy}, journal = {Sci. Rep.}, volume = {7}, year = {2017}, pages = {14846}, keywords = {BF, MF}, doi = {10.1038/s41598-017-13940-w}, author = {K. Rebro{\v s}ov{\'a} and M {\v S}iler and O. Samek and F. R{\r u}{\v z}i{\v c}ka and S. Bernatov{\'a} and V. Hol{\'a} and J Je{\v z}ek and P. Zem{\'a}nek and J. Sokolov{\'a} and P. Petr{\'a}{\v s}} } @article { JonasJOSAB17, title = {Thermal tuning of spectral emission from optically trapped liquid-crystal droplet resonators}, journal = {J. Opt. Soc. Am. B}, volume = {34}, year = {2017}, pages = {1855-1864}, keywords = {BF, MF}, doi = {10.1364/JOSAB.34.001855}, author = {A. Jon{\'a}{\v s} and Z. Pil{\'a}t and J Je{\v z}ek and Silva Bernatov{\'a} and T. Fo{\v r}t and P. Zem{\'a}nek and Mehdi Aas and Alper Kiraz} } @article { SilerSR17, title = {Thermally induced micro-motion by inflection in optical potential}, journal = {Sci. Rep.}, volume = {7}, year = {2017}, pages = {1697}, keywords = {LF, MF}, issn = {2045-2322}, doi = {10.1038/s41598-017-01848-4}, author = {M {\v S}iler and P J{\'a}kl and Oto Brzobohat{\'y} and Artem Ryabov and Radim Filip and P. Zem{\'a}nek} } @article { BrzobohatyOE16, title = {Chiral particles in the dual-beam optical trap}, journal = {Opt. Express}, volume = {24}, year = {2016}, pages = {26382-26391}, keywords = {MF}, doi = {10.1364/OE.24.026382}, author = {Oto Brzobohat{\'y} and Hernandez, Raul Josue and S. H. Simpson and Mazzulla, Alfredo and Cipparrone, Gabriella and P. Zem{\'a}nek} } @article { SilerOL16, title = {Direct measurement of the temperature profile close to an optically trapped absorbing particle}, journal = {Opt. Lett.}, volume = {41}, year = {2016}, pages = {870-873}, keywords = {MF}, doi = {10.1364/OL.41.000870}, author = {M {\v S}iler and J Je{\v z}ek and P J{\'a}kl and Z. Pil{\'a}t and P. Zem{\'a}nek} } @article { TomoriJOpt16, title = {Holographic Raman tweezers controlled by Multimodal Natural User Interface}, journal = {J. Opt.}, volume = {18}, year = {2016}, pages = {015602:1-9}, keywords = {MF}, doi = {10.1088/2040-8978/18/1/015602}, author = {Z. Tomori and P. Ke{\v s}a and M. Nikorovi{\v c} and J. Ka{\v n}ka and P J{\'a}kl and M. {\v S}er{\'y} and Silva Bernatov{\'a} and E. Valu{\v s}ov{\'a} and M. Antal{\'\i}k and P. Zem{\'a}nek} } @article { HrubanovaMM16, title = {Morphological and Production Changes in Stressed Red Yeasts Monitored Using SEM and Raman Spectroscopy}, journal = {Microscopy and Microanalysis}, volume = {22}, year = {2016}, pages = {S3}, keywords = {MF}, doi = {10.1017/S1431927616006577}, author = {K. Hrubanov{\'a} and O. Samek and A. Haronikov{\'a} and Silva Bernatov{\'a} and P. Zem{\'a}nek and I. M{\'a}rov{\'a} and V. Krzy{\v z}{\'a}nek} } @article { FilipJOpt16, title = {Noise-to-signal transition of a Brownian particle in the cubic potential: I. general theory}, journal = {Journal of Optics}, volume = {18}, number = {6}, year = {2016}, pages = {065401}, keywords = {MF}, doi = {10.1088/2040-8978/18/6/065401}, author = {Radim Filip and P. Zem{\'a}nek} } @article { ZemanekJOpt16, title = {Noise-to-signal transition of a Brownian particle in the cubic potential: II. optical trapping geometry}, journal = {Journal of Optics}, volume = {18}, number = {6}, year = {2016}, pages = {065402}, keywords = {MF}, doi = {10.1088/2040-8978/18/6/065401}, author = {P. Zem{\'a}nek and M {\v S}iler and Oto Brzobohat{\'y} and P J{\'a}kl and Radim Filip} } @article {SamekSENS16, title = {Quantitative Raman Spectroscopy Analysis of Polyhydroxyalkanoates Produced by Cupriavidus necator H16}, journal = {Sensors}, volume = {16}, year = {2016}, pages = {1808}, keywords = {MF}, doi = {10.3390/s16111808}, author = {O. Samek and S. Obru{\v c}a and M {\v S}iler and P. Sedl{\'a}{\v c}ek and Pavla Bene{\v s}ov{\'a} and D. Ku{\v c}era and I. M{\'a}rov{\'a} and J Je{\v z}ek and Silva Bernatov{\'a} and P. Zem{\'a}nek} } @article { SimpsonPRA16, title = {Synchronization of colloidal rotors through angular optical binding}, journal = {Phys. Rev. A}, volume = {93}, year = {2016}, pages = {023842}, keywords = {MF}, doi = {10.1103/PhysRevA.93.023842}, author = {S. H. Simpson and Luk{\'a}{\v s} Chv{\'a}tal and P. Zem{\'a}nek} } @article { RyabovPRE16, title = {Thermally-induced passage and current of particles in highly unstable optical potential}, journal = {Phys. Rev.E}, volume = {16}, year = {2016}, pages = {042108}, keywords = {MF}, doi = {10.1103/PhysRevE.94.042108}, author = {Artem Ryabov and P. Zem{\'a}nek and Radim Filip} } @article { ChvatalOR15, title = {Binding of a pair of Au nanoparticles in a wide Gaussian standing wave}, journal = {Opt. Rev.}, volume = {22}, year = {2015}, pages = {157-161}, keywords = {MF}, doi = {10.1007/s10043-015-0027-3}, author = {Luk{\'a}{\v s} Chv{\'a}tal and Oto Brzobohat{\'y} and P. Zem{\'a}nek} } @article { BrzobohatyOE15b, title = {Complex rotational dynamics of multiple spheroidal particles in a circularly polarized, dual beam trap}, journal = {Opt. Express}, volume = {23}, year = {2015}, pages = {7273-7287}, keywords = {MF}, doi = {10.1364/OE.23.007273}, author = {Oto Brzobohat{\'y} and Alejandro V. Arzola and M {\v S}iler and Luk{\'a}{\v s} Chv{\'a}tal and P J{\'a}kl and S. H. Simpson and P. Zem{\'a}nek} } @article { KrzyzanekMM15, title = {Cryo-SEM and Raman Spectroscopy Study of the Involvement of Polyhydroxyalkanoates in Stress Response of Bacteria}, journal = {Microscopy and Microanalysis}, volume = {21}, number = {S3}, year = {2015}, pages = {183-184}, keywords = {MF}, doi = {10.1017/S1431927615001713}, author = {V. Krzy{\v z}{\'a}nek and K. Hrubanov{\'a} and O. Samek and S. Obru{\v c}a and I. M{\'a}rov{\'a} and Silva Bernatov{\'a} and M {\v S}iler and P. Zem{\'a}nek} } @article { SamekJBO15, title = {Identification of individual biofilm-forming bacterial cells using Raman tweezers}, journal = {J. Biomed. Opt.}, volume = {20}, number = {5}, year = {2015}, keywords = {MF}, doi = {10.1117/1.JBO.20.5.051038}, author = {O. Samek and Silva Bernatov{\'a} and J Je{\v z}ek and M {\v S}iler and M. {\v S}er{\'y} and V. Krzy{\v z}{\'a}nek and K. Hrubanov{\'a} and P. Zem{\'a}nek and V. Hol{\'a} and F. R{\r u}{\v z}i{\v c}ka} } @article { MlynarikovaSENS15, title = {Influence of Culture Media on Microbial Fingerprints Using Raman Spectroscopy}, journal = {Sensors}, volume = {15}, year = {2015}, pages = {29635-29647}, keywords = {MF}, doi = {10.3390/s151129635}, author = {K. Mlynarikov{\'a} and O. Samek and Silva Bernatov{\'a} and F. R{\r u}{\v z}i{\v c}ka and J Je{\v z}ek and A. Haronikov{\'a} and M {\v S}iler and P. Zem{\'a}nek and V. Hol{\'a}} } @article { HrubanovaMM15, title = {Monitoring of Multilayered Bacterial Biofilm Morphology by Cryo-SEM for Raman Spectroscopy Measurements}, journal = {Microscopy and Microanalysis}, volume = {21}, year = {2015}, pages = {187-188}, keywords = {MF}, doi = {10.1017/S1431927615001737}, author = {K. Hrubanov{\'a} and Silva Bernatov{\'a} and O. Samek and M. {\v S}er{\'y} and P. Zem{\'a}nek and J. Nebes{\'a}{\v r}ov{\'a} and F. R{\r u}{\v z}i{\v c}ka and V. Krzy{\v z}{\'a}nek} } @article { BrzobohatyOE15, title = {Non-spherical gold nanoparticles trapped in optical tweezers: shape matters}, journal = {Opt. Express}, volume = {23}, year = {2015}, pages = {8179-8189}, keywords = {MF}, doi = {10.1364/OE.23.008179}, author = {Oto Brzobohat{\'y} and M {\v S}iler and J. Trojek and Luk{\'a}{\v s} Chv{\'a}tal and V{\'\i}t{\v e}zslav Kar{\'a}sek and P. Zem{\'a}nek} } @article { SilerJQSRT15, title = {Optical trapping in secondary maxima of focused laser beam}, journal = {J. Quant. Spectrosc. Radiat. Transf.}, volume = {162}, year = {2015}, pages = {114 - 121}, keywords = {MF}, doi = {10.1016/j.jqsrt.2015.03.003}, author = {M {\v S}iler and P. Zem{\'a}nek} } @article { SamekMM15, title = {SEM and Raman Spectroscopy Applied to Biomass Analysis for Application in the Field of Biofuels and Food Industry}, journal = {Microscopy and Microanalysis}, volume = {21}, year = {2015}, pages = {1775-1776}, keywords = {MF}, doi = {10.1017/S1431927615009654}, author = {O. Samek and A. Haronikov{\'a} and N. Va{\v s}kovicov{\'a} and K. Hrubanov{\'a} and J Je{\v z}ek and I. M{\'a}rov{\'a} and V. Krzy{\v z}{\'a}nek and P. Zem{\'a}nek} } @article { BrzobohatySR15, title = {Three-Dimensional Optical Trapping of a Plasmonic Nanoparticle using Low Numerical Aperture Optical Tweezers}, journal = {Sci. Rep.}, volume = {5}, year = {2015}, pages = {8106}, keywords = {MF}, doi = {10.1038/srep08106}, author = {Oto Brzobohat{\'y} and M {\v S}iler and J. Trojek and Luk{\'a}{\v s} Chv{\'a}tal and V{\'\i}t{\v e}zslav Kar{\'a}sek and Ale{\v s} Pat{\'a}k and Zuzana Pokorn{\'a} and Filip Mika and P. Zem{\'a}nek} } @article {PorizkaSENS14, title = {Algal Biomass Analysis by Laser-Based Analytical Techniques{\textemdash}A Review}, journal = {Sensors}, volume = {14}, year = {2014}, pages = {17725-17752}, keywords = {MF}, doi = {10.3390/s140917725}, author = {Po{\v r}{\'\i}zka, P. and P. Proch{\'a}zkov{\'a} and D. Proch{\'a}zka and Sl{\'a}dkov{\'a}, L. and Novotn{\'y}, J. and Petrilak, M. and Brada, M. and O. Samek and Pil{\'a}t, Z. and P. Zem{\'a}nek and Adam, V. and Kizek, R. and Novotn{\'y}, J. and Kaiser, J.} } @article { SamekIJMC14, title = {Candida parapsilosis Biofilm Identification by Raman Spectroscopy}, journal = {Int. J. Mol. Sci.}, volume = {15}, year = {2014}, pages = {23924-23935}, keywords = {MF}, doi = {10.3390/ijms151223924}, author = {O. Samek and K. Mlynarikov{\'a} and Silva Bernatov{\'a} and J Je{\v z}ek and V. Krzy{\v z}{\'a}nek and M {\v S}iler and P. Zem{\'a}nek and F. R{\r u}{\v z}i{\v c}ka and V. Hol{\'a} and M. Mahelov{\'a}} } @article { JaklOE14, title = {Optical sorting of nonspherical and living microobjects in moving interference structures}, journal = {Opt. Express}, volume = {22}, year = {2014}, pages = {29746-29760}, keywords = {MF}, doi = {10.1364/OE.22.029746}, author = {P J{\'a}kl and Alejandro V. Arzola and M {\v S}iler and Luk{\'a}{\v s} Chv{\'a}tal and Karen Volke-Sep{\'u}lveda and P. Zem{\'a}nek} } @article { ArzolaOE14, title = {Rotation, oscillation and hydrodynamic synchronization of optically trapped oblate spheroidal microparticles}, journal = {Opt. Express}, volume = {22}, year = {2014}, pages = {16207-16221}, keywords = {MF}, doi = {10.1364/OE.22.016207}, author = {Alejandro V. Arzola and P J{\'a}kl and Luk{\'a}{\v s} Chv{\'a}tal and P. Zem{\'a}nek} } @article { BrzobohatyNP13, title = {Experimental demonstration of optical transport, sorting and self-arrangement using a {\textquoteleft}tractor beam{\textquoteright}}, journal = {Nature Photon.}, volume = {7}, number = {2}, year = {2013}, pages = {123-127}, keywords = {MF}, doi = {10.1038/nphoton.2012.332}, author = {Oto Brzobohat{\'y} and V{\'\i}t{\v e}zslav Kar{\'a}sek and M {\v S}iler and Luk{\'a}{\v s} Chv{\'a}tal and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and P. Zem{\'a}nek} } @article { BernatovaMol13, title = {Following the mechanisms of bacteriostatic versus bacericidal action using Raman spectroscopy}, journal = {Molecules}, volume = {18}, year = {2013}, pages = {13188-13199}, keywords = {MF}, doi = {10.3390/molecules181113188}, author = {Silva Bernatov{\'a} and O. Samek and Z. Pil{\'a}t and M. {\v S}er{\'y} and J Je{\v z}ek and P J{\'a}kl and M {\v S}iler and V. Krzy{\v z}{\'a}nek and P. Zem{\'a}nek and V. Hol{\'a} and M. Dvo{\v r}{\'a}{\v c}kov{\'a} and F. R{\r u}{\v z}i{\v c}ka} } @article { TomoriOPJ13, title = {Holographic Raman tweezers controlled by hand gestures and voice commands}, journal = {Optics and Photonics Journal}, volume = {3}, year = {2013}, pages = {331-336}, keywords = {MF}, doi = {10.4236/opj.2013.32B076}, author = {Z. Tomori and M. Antal{\'\i}k and P. Ke{\v s}a and J. Ka{\v n}ka and P J{\'a}kl and M. {\v S}er{\'y} and Silva Bernatov{\'a} and P. Zem{\'a}nek} } @article { SilerJQSRT13, title = {Metallic nanoparticles in a standing wave: optical force and heating}, journal = {J. Quant. Spectrosc. Radiat. Transf.}, volume = {126}, year = {2013}, pages = {84-90}, keywords = {MF}, doi = {10.1016/j.jqsrt.2012.10.005}, author = {M {\v S}iler and Luk{\'a}{\v s} Chv{\'a}tal and P. Zem{\'a}nek} } @article { SilerJQSRT13b, title = {Optical forces in a non-diffracting vortex beam}, journal = {J. Quant. Spectrosc. Radiat. Transf.}, volume = {126}, year = {2013}, pages = {78-83}, keywords = {MF}, doi = {10.1016/j.jqsrt.2012.08.030}, author = {M {\v S}iler and P. Zem{\'a}nek} } @article { BrzobohatyOL13, title = {Optical manipulation of aerosol droplets using a holographic dual and single beam trap}, journal = {Opt. Lett.}, volume = {38}, number = {22}, year = {2013}, pages = {4601-4604}, keywords = {MF}, doi = {10.1364/OL.38.004601}, author = {Oto Brzobohat{\'y} and M {\v S}iler and J Je{\v z}ek and P J{\'a}kl and P. Zem{\'a}nek} } @article { PilatJPPB13, title = {Optical trapping of microalgae at 735{\textendash}1064 nm: Photodamage assessment}, journal = {J. Photochem. Photobiol. B}, volume = {121}, year = {2013}, pages = {27 - 31}, keywords = {MF}, doi = {10.1016/j.jphotobiol.2013.02.006}, author = {Z. Pil{\'a}t and J Je{\v z}ek and M. {\v S}er{\'y} and M. Trt{\'\i}lek and L. Nedbal and P. Zem{\'a}nek} } @article {AasOE13, title = {Spectral tuning of lasing emission from optofluidic droplet microlasers using optical stretching}, journal = {Opt. Express}, volume = {21}, number = {18}, year = {2013}, pages = {21380-21394}, keywords = {MF}, doi = {10.1364/OE.21.021380}, author = {Mehdi Aas and A. Jon{\'a}{\v s} and Alper Kiraz and Oto Brzobohat{\'y} and J Je{\v z}ek and Z. Pil{\'a}t and P. Zem{\'a}nek} } @article {PorizkaSAB12, title = {Application of laser-induced breakdown spectroscopy to the analysis of algal biomass for industrial biotechnology}, journal = {Spectrochim. Acta B}, volume = {74-75}, year = {2012}, pages = {169-176}, keywords = {MF}, doi = {10.1016/j.sab.2012.06.014}, author = {P. Po{\v r}{\'\i}zka and D. Proch{\'a}zka and Z. Pil{\'a}t and Kraj{\v c}arov{\'a}, L. and J. Kaiser and Malina, R. and J. Novotn{\'y} and P. Zem{\'a}nek and J Je{\v z}ek and M. {\v S}er{\'y} and Silva Bernatov{\'a} and V. Krzy{\v z}{\'a}nek and Dobransk{\'a}, K. and K. Novotn{\'y} and M. Trt{\'\i}lek and O. Samek} } @article { TrojekJOSAA12, title = {Optical alignment and confinement of an ellipsoidal nanorod in optical tweezers: a theoretical study}, journal = {J. Opt. Soc. Am. A}, volume = {29}, number = {7}, year = {2012}, pages = {1224{\textendash}1236}, keywords = {MF}, doi = {10.1364/JOSAA.29.001224}, author = {J. Trojek and Luk{\'a}{\v s} Chv{\'a}tal and P. Zem{\'a}nek} } @article { SilerOE12, title = {Optical forces induced behavior of a particle in a non-diffracting vortex beam}, journal = {Opt. Express}, volume = {20}, year = {2012}, pages = {24304-24319}, keywords = {MF}, doi = {10.1364/OE.20.024304}, author = {M {\v S}iler and P J{\'a}kl and Oto Brzobohat{\'y} and P. Zem{\'a}nek} } @article { PilatJAP2012, title = {Raman microspectroscopy of algal lipid bodies: beta-carotene quantification}, journal = {J. Appl. Phycol.}, volume = {24}, year = {2012}, pages = {541-546}, keywords = {MF}, doi = {10.1007/s10811-011-9754-4}, author = {Z. Pil{\'a}t and Silva Bernatov{\'a} and J Je{\v z}ek and M. {\v S}er{\'y} and O. Samek and P. Zem{\'a}nek and L. Nedbal and M. Trt{\'\i}lek} } @article { SilerAPL12, title = {Speed enhancement of multi-particle chain in a traveling standing wave}, journal = {Appl. Phys. Lett.}, volume = {100}, year = {2012}, pages = {051103}, keywords = {MF}, doi = {10.1063/1.3680234}, author = {M {\v S}iler and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and P. Zem{\'a}nek} } @article { SamekLPL11, title = {Characterization of oil-producing microalgae using Raman spectroscopy}, journal = {Laser Phys. Lett.}, volume = {8}, year = {2011}, pages = {701{\textendash}709}, keywords = {MF}, doi = {10.1002/lapl.201110060}, author = {O. Samek and P. Zem{\'a}nek and A. Jon{\'a}{\v s} and Telle, H. H.} } @article { BrzobohatyAPL11, title = {Dynamic size tuning of multidimensional optically bound matter}, journal = {Appl. Phys. Lett.}, volume = {99}, year = {2011}, pages = {101105}, keywords = {MF}, doi = {10.1063/1.3634007}, author = {Oto Brzobohat{\'y} and V{\'\i}t{\v e}zslav Kar{\'a}sek and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and P. Zem{\'a}nek} } @article { CizmarLPL11, title = {The holographic optical micro-manipulation system based on counter-propagating beams}, journal = {Laser Phys. Lett.}, volume = {8}, year = {2011}, pages = {50{\textendash}56}, keywords = {MF}, doi = {10.1002/lapl.201010100}, author = {Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and Oto Brzobohat{\'y} and Kishan Dholakia and P. Zem{\'a}nek} } @article { SilerJOPT11, title = {Parametric study of optical forces acting upon nanoparticles in a single, or a standing, evanescent wave}, journal = {J. Opt.}, volume = {13}, year = {2011}, pages = {044016:1{\textendash}9}, keywords = {MF}, doi = {10.1088/2040-8978/13/4/044016}, author = {M {\v S}iler and P. Zem{\'a}nek} } @article { BrzobohatyOE11, title = {Static and dynamic behavior of two optically bound microparticles in a standing wave}, journal = {Opt. Express}, volume = {19}, year = {2011}, pages = {19613{\textendash}19626}, keywords = {MF}, doi = {10.1364/OE.19.019613}, author = {Oto Brzobohat{\'y} and V{\'\i}t{\v e}zslav Kar{\'a}sek and M {\v S}iler and J. Trojek and P. Zem{\'a}nek} } @article { BrzobohatyOE10, title = {Experimental and theoretical determination of optical binding forces}, journal = {Opt. Express}, volume = {18}, number = {24}, year = {2010}, pages = {25389{\textendash}25402}, keywords = {MF}, issn = {1094-4087}, doi = {10.1364/OE.18.025389}, author = {Oto Brzobohat{\'y} and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and V{\'\i}t{\v e}zslav Kar{\'a}sek and M {\v S}iler and Kishan Dholakia and P. Zem{\'a}nek} } @article { DholakiaRMP10, title = {Gripped by light: Optical binding}, journal = {Rev. Mod. Phys.}, volume = {82}, year = {2010}, pages = {1767{\textendash}1791}, keywords = {MF}, doi = {10.1103/RevModPhys.82.1767}, author = {Kishan Dholakia and P. Zem{\'a}nek} } @article { SilerNJP10, title = {Particle jumps between optical traps in a one-dimensional optical lattice}, journal = {New. J. Phys.}, volume = {12}, year = {2010}, pages = {083001:1{\textendash}20}, keywords = {MF}, doi = {10.1088/1367-2630/12/8/083001}, author = {M {\v S}iler and P. Zem{\'a}nek} } @article { Samek2010, title = {Raman Microspectroscopy of Individual Algal Cells: Sensing Unsaturation of Storage Lipids in vivo}, journal = {Sensors}, volume = {10}, year = {2010}, pages = {8635{\textendash}8651}, keywords = {MF}, doi = {10.3390/s100908635}, author = {O. Samek and A. Jon{\'a}{\v s} and Z. Pil{\'a}t and P. Zem{\'a}nek and L. Nedbal and T{\v r}{\'\i}ska, J. and Kotas, P. and M. Trt{\'\i}lek} } @article { TrojekOE09, title = {Extreme axial optical force in a standing wave achieved by optimized object shape}, journal = {Opt. Express}, volume = {17}, number = {13}, year = {2009}, pages = {10472{\textendash}10488}, publisher = {OSA}, keywords = {MF}, doi = {10.1364/OE.17.010472}, author = {J. Trojek and V{\'\i}t{\v e}zslav Kar{\'a}sek and P. Zem{\'a}nek} } @article { KarasekJOPA09, title = {Longitudinal optical binding of several spherical particles studied by the coupled dipole method}, journal = {J. Opt. A: Pure Appl. Opt.}, volume = {11}, year = {2009}, pages = {034009}, keywords = {MF}, doi = {10.1088/1464-4258/11/3/034009}, author = {V{\'\i}t{\v e}zslav Kar{\'a}sek and Oto Brzobohat{\'y} and P. Zem{\'a}nek} } @article { BrzobohatyOE08, title = {High quality quasi-Bessel beam generated by round-tip axicon}, journal = {Opt. Express}, volume = {16}, year = {2008}, pages = {12688{\textendash}12700}, keywords = {MF}, doi = {10.1364/OE.16.012688}, author = {Oto Brzobohat{\'y} and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and P. Zem{\'a}nek} } @article { JonasEPH08, title = {Light at work: The use of optical forces for particle manipulation, sorting, and analysis.}, journal = {Electophoresis}, volume = {29}, year = {2008}, pages = {4813{\textendash}4851}, keywords = {MF}, doi = {10.1002/elps.200800484}, author = {A. Jon{\'a}{\v s} and P. Zem{\'a}nek} } @article { KarasekPRL08, title = {Long-range one-dimensional longitudinal optical binding}, journal = {Phys. Rev. Lett.}, volume = {101}, number = {14}, year = {2008}, pages = {143601}, keywords = {MF}, issn = {0031-9007}, doi = {10.1103/PhysRevLett.101.143601}, author = {V{\'\i}t{\v e}zslav Kar{\'a}sek and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and Oto Brzobohat{\'y} and P. Zem{\'a}nek and V. Garc{\'e}s-Ch{\'a}vez and Kishan Dholakia} } @article { JaklAPL08, title = {Static optical sorting in a laser interference field}, journal = {Appl. Phys. Lett.}, volume = {92}, number = {16}, year = {2008}, pages = {161110:1{\textendash}3}, keywords = {MF}, issn = {0003-6951}, doi = {10.1063/1.2913759}, author = {P J{\'a}kl and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and M. {\v S}er{\'y} and P. Zem{\'a}nek} } @article { SilerNJP08, title = {Surface delivery of a single nanoparticle under moving evanescent standing-wave illumination}, journal = {New. J. Phys.}, volume = {10}, year = {2008}, pages = {113010}, keywords = {MF}, issn = {1367-2630}, doi = {10.1088/1367-2630/10/11/113010}, author = {M {\v S}iler and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and A. Jon{\'a}{\v s} and P. Zem{\'a}nek} } @article { KarasekJOPA07, title = {Analytical description of longitudinal optical binding of two spherical nanoparticles}, journal = {J. Opt. A: Pure Appl. Opt.}, volume = {9}, year = {2007}, pages = {S215{\textendash}S220}, keywords = {MF}, doi = {10.1088/1464-4258/9/8/S14}, author = {V{\'\i}t{\v e}zslav Kar{\'a}sek and P. Zem{\'a}nek} } @article { JaklJOPAA07, title = {Axial optical trap stiffness influenced by retro-reflected beam}, journal = {J. Opt. A: Pure Appl. Opt.}, volume = {9}, number = {8, Sp. Iss. SI}, year = {2007}, pages = {S251{\textendash}S255}, keywords = {MF}, issn = {1464-4258}, doi = {10.1088/1464-4258/9/8/S19}, author = {P J{\'a}kl and M. {\v S}er{\'y} and J Je{\v z}ek and M. Li{\v s}ka and P. Zem{\'a}nek} } @article { DholakiaMCB07, title = {Cellular and colloidal separation using optical forces}, journal = {Methods in Cell Biology}, volume = {82}, year = {2007}, pages = {467{\textendash}495}, keywords = {MF}, doi = {10.1016/S0091-679X(06)82017-0}, author = {Kishan Dholakia and MacDonald, M. P. and P. Zem{\'a}nek and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r} } @article { SilerOC07, title = {Optical forces acting on a nanoparticle placed into an interference evanescent field}, journal = {Opt. Commun.}, volume = {275}, year = {2007}, pages = {409{\textendash}420}, keywords = {MF}, doi = {10.1016/j.optcom.2007.03.074}, author = {M {\v S}iler and P. Zem{\'a}nek} } @article { CizmarOE07, title = {Optical tracking of spherical micro-objects in spatially periodic interference fields}, journal = {Opt. Express}, volume = {15}, year = {2007}, pages = {2262{\textendash}2272}, keywords = {MF}, doi = {10.1364/OE.15.002262}, author = {Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and P. Zem{\'a}nek} } @article { JaklJOAM07, title = {Opto-fluidic micromanipulation system based on integrated polymer waveguides}, journal = {J. Optoel Adv. Mater.}, volume = {9}, year = {2007}, pages = {2148-2151}, keywords = {MF}, author = {P J{\'a}kl and M. {\v S}er{\'y} and J Je{\v z}ek and P. Zem{\'a}nek and Ormos, P. and Valkai, S. and Kelemen, L.} } @article { MilneOE07, title = {Transverse particle dynamics in a Bessel beam}, journal = {Opt. Express}, volume = {15}, number = {21}, year = {2007}, pages = {13972{\textendash}13987}, publisher = {OSA}, keywords = {MF}, doi = {10.1364/OE.15.013972}, url = {http://www.opticsexpress.org/abstract.cfm?URI=oe-15-21-13972}, author = {Milne, Graham and Kishan Dholakia and McGloin, David and Karen Volke-Sep{\'u}lveda and P. Zem{\'a}nek} } @article {KarasekAPB06, title = {Analysis of optical binding in one dimension}, journal = {Appl. Phys. B}, volume = {84}, year = {2006}, pages = {149{\textendash}156}, keywords = {MF}, doi = {10.1007/s00340-006-2297-8}, author = {V{\'\i}t{\v e}zslav Kar{\'a}sek and Kishan Dholakia and P. Zem{\'a}nek} } @article {JezekOE06, title = {Formation of long and thin polymer fiber using nondiffracting beam}, journal = {Opt. Express}, volume = {14}, year = {2006}, pages = {8506-8515}, keywords = {MF}, doi = {10.1364/OE.14.008506}, author = {J Je{\v z}ek and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and V. Ned{\v e}la and P. Zem{\'a}nek} } @article {SilerAPB06, title = {Optical forces generated by evanescent standing waves and their usage for sub-micron particle delivery}, journal = {Appl. Phys. B}, volume = {84}, year = {2006}, pages = {157{\textendash}165}, keywords = {MF}, doi = {10.1007/s00340-006-2235-9}, author = {M {\v S}iler and Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and M. {\v S}er{\'y} and P. Zem{\'a}nek} } @article {CizmarAPB06, title = {An optical nanotrap array movable over a milimetre range}, journal = {Appl. Phys. B}, volume = {84}, year = {2006}, pages = {197{\textendash}203}, keywords = {MF}, doi = {10.1007/s00340-006-2221-2}, author = {Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and M {\v S}iler and P. Zem{\'a}nek} } @article {CizmarPRB06, title = {Optical sorting and detection of sub-micron objects in a motional standing wave}, journal = {Phys. Rev. B}, volume = {74}, year = {2006}, pages = {035105:1-6}, keywords = {MF}, doi = {10.1103/PhysRevB.74.035105}, author = {Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and M {\v S}iler and M. {\v S}er{\'y} and P. Zem{\'a}nek and V. Garc{\'e}s-Ch{\'a}vez and Kishan Dholakia} } @article {CizmarNJP06, title = {Sub-micron particle organization by self-imaging of non-diffracting beams}, journal = {New. J. Phys.}, volume = {8}, year = {2006}, pages = {43}, keywords = {MF}, doi = {10.1088/1367-2630/8/3/043}, author = {Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and V. Koll{\'a}rov{\'a} and Zden{\v e}k Bouchal and P. Zem{\'a}nek} } @article {CizmarAPL05, title = {Optical conveyor belt for delivery of submicron objects}, journal = {Appl. Phys. Lett.}, volume = {86}, year = {2005}, pages = {174101-1{\textendash}174101-3}, keywords = {MF}, doi = {10.1063/1.1915543}, author = {Tom{\'a}{\v s} {\v C}i{\v z}m{\'a}r and V. Garc{\'e}s-Ch{\'a}vez and Kishan Dholakia and P. Zem{\'a}nek} } @article {CasaburiOC05, title = {Two-and three-beam interferometric optical tweezers}, journal = {Opt. Commun.}, volume = {251}, year = {2005}, pages = {393{\textendash}404}, keywords = {MF}, doi = {10.1016/j.optcom.2005.03.029}, author = {A. Casaburi and G. Pesce and P. Zem{\'a}nek and A. Sasso} } @article {ZemanekOPTCOMM04, title = {Optical forces acting on Rayleigh particle placed into interference field}, journal = {Opt. Commun.}, volume = {240}, year = {2004}, pages = {401-415}, keywords = {MF}, doi = {10.1016/j.optcom.2004.06.051}, author = {P. Zem{\'a}nek and V{\'\i}t{\v e}zslav Kar{\'a}sek and A. Sasso} } @article {JaklJMO03, title = {Behaviour of an optically trapped probe approaching a dielectric interface}, journal = {J Mod. Optics}, volume = {50}, year = {2003}, pages = {1615-1625}, keywords = {MF}, doi = {10.1080/09500340308235235}, author = {P J{\'a}kl and M. {\v S}er{\'y} and J Je{\v z}ek and A. Jon{\'a}{\v s} and M. Li{\v s}ka and P. Zem{\'a}nek} } @article {ZemanekOPTCOMM03, title = {Theoretical comparison of optical traps created by standing wave and single beam}, journal = {Opt. Commun.}, volume = {220}, year = {2003}, pages = {401-412}, keywords = {MF}, doi = {10.1016/S0030-4018(03)01409-3}, author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and P J{\'a}kl and M. {\v S}er{\'y} and J Je{\v z}ek and M. Li{\v s}ka} } @article {ZemanekJOSAA02, title = {Simplified description of optical forces acting on a nanoparticle in the Gaussian standing wave}, journal = {J. Opt. Soc. Am. A}, volume = {19}, year = {2002}, pages = {1025-1034}, keywords = {MF}, doi = {10.1364/JOSAA.19.001025}, author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and M. Li{\v s}ka} } @article {JonasOL01, title = {Single beam trapping in front of reflective surfaces}, journal = {Opt. Lett.}, volume = {26}, year = {2001}, pages = {1466{\textendash}1468}, keywords = {MF}, doi = {10.1364/OL.26.001466}, author = {A. Jon{\'a}{\v s} and P. Zem{\'a}nek and E. - L. Florin} } @article {ZemanekOL99, title = {Optical trapping of nanoparticles and microparticles using Gaussian standing wave.}, journal = {Opt. Lett.}, volume = {24}, year = {1999}, pages = {1448{\textendash}1450}, keywords = {MF}, doi = {10.1364/OL.24.001448}, author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and L. {\v S}r{\'a}mek and M. Li{\v s}ka} } @article {ZemanekOPTCOMM98a, title = {Atomic dipole trap formed by a blue detuned strong Gaussian standing wave}, journal = {Opt. Commun.}, volume = {146}, year = {1998}, pages = {119{\textendash}123}, keywords = {MF}, doi = {10.1016/S0030-4018(97)00526-9}, author = {P. Zem{\'a}nek and C. J. Foot} } @article {ZemanekOPTCOMM98b, title = {Optical trapping of Rayleigh particles using a Gaussian standing wave}, journal = {Opt. Commun.}, volume = {151}, year = {1998}, pages = {273{\textendash}285}, keywords = {MF}, doi = {10.1016/S0030-4018(98)00093-5}, author = {P. Zem{\'a}nek and A. Jon{\'a}{\v s} and L. {\v S}r{\'a}mek and M. Li{\v s}ka} }